Explore projects

script that makes a visual representation of a spot containing ICE.

Images docker openshift ready

Blocks plugin for Icy. Also known as "Protocols SDK" This plugin provide interfaces to make plugin compatible with Protocols(Graphical Programming).

MsgPack Core library for Icy.

https://msgpack.org/

Repository containing data for the paper by Paireau et al. "Impact of non-pharmaceutical interventions, weather, vaccination, and variants on COVID-19 transmission across departments in France"

Old parent POM for all Icy plugin projects. Need to use the POM Icy as unique parent POM file: https://gitlab.pasteur.fr/bia/parent-pom-base

Low-level library for reading and writing Matlab .mat files

Old parent POM for all Icy core related projects (Icy-Kernel and customized libraries used for Icy-Kernel). Now we need to use the POM Icy as unique parent POM file: https://gitlab.pasteur.fr/bia/parent-pom-base

You can find here the scripts corresponding to this paper: "A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach"

pipeline nextflow

Pytorch implementation of the Spline dist cell segmentation method

Export sequences from Icy to Matlab *.mat files

Import Matlab *.mat files as sequences in Icy