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Yoann DUFRESNE / bpm
GNU Affero General Public License v3.0Updated -
Project Testing for the Core-Genome EPA scripts Checking for problems with dependencies, code bugs, and other problems that might have been unseen
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Bioimage Analysis / Intensity Projection
GNU General Public License v3.0 onlyIntensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.
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Codes and Data for the paper “SARS-CoV-2 IgG seroprevalence surveys in blood donors before the vaccination campaign, France 2020-2021”.
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scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)
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GIPhy / GenoMed
GNU Affero General Public License v3.0Estimating Genome Medoid
Topics: fastaUpdated -
Code and data for the article by Paireau et al. "An ensemble model based on early predictors to forecast COVID-19 healthcare demand in France"
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GIPhy / fastq_info
GNU Affero General Public License v3.0Estimating standard descriptive statistics from FASTQ files
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