Explore projects
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Bioimage Analysis / Rhino for Icy
GNU General Public License v3.0 onlyRhino Library for Icy
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Bioimage Analysis / Rigid Registration
GNU General Public License v3.0 onlyA simple tool to correct chromatic shifts as well as temporal drift (including translations and rotations), based on spectral correlation.
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Bioimage Analysis / Vecmath
GNU General Public License v3.0 onlyProvides 3D vector mathematics classes.
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Bioimage Analysis / Workbooks
GNU General Public License v3.0 onlyToolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software
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Bioimage Analysis / ROI intensity evolution
GNU General Public License v3.0 onlyCompute and display the intensity evolution for regions of interests (ROIs) through time. Results can be refreshed automatically as ROIs are changed.
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Bioimage Analysis / ROI Pool
GNU General Public License v3.0 onlyManage a list of ROIs that the user can store and pop back in one click.
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Bioimage Analysis / ROI tagger
GNU General Public License v3.0 onlyCreate a list of tag and apply them to ROIs.
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Bioimage Analysis / Spot Detection Utilities
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Texture segmentation
GNU General Public License v3.0 onlyIt is a toy plugin to test semi-supervised texture segmentation using the new SLBPriu texture descriptor.
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Bioimage Analysis / JavaCL for Icy
GNU General Public License v3.0 onlyJavaCL library for Icy
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Bioimage Analysis / RSyntaxTextArea for Icy
GNU General Public License v3.0 onlyRSyntaxTextArea library for Icy. Badically it provides a TextArea component with syntax highlight for different languages.
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Bioimage Analysis / Jython for Icy
GNU General Public License v3.0 onlyJython library for Icy
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GIPhy / AlienTrimmer
GNU Affero General Public License v3.0Fast trimming of sequencing reads
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Bioimage Analysis / Java3D for Icy
GNU General Public License v3.0 onlyJava3D library for Icy
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Bioimage Analysis / Jama for Icy
GNU General Public License v3.0 onlyJama Matrix Package library for Icy
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Bioimage Analysis / Intensity Projection
GNU General Public License v3.0 onlyIntensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.
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Bioimage Analysis / Color Bar
GNU General Public License v3.0 onlyDisplay the colormap over the image using an overlay.
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Bioimage Analysis / 3D Rotation
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Angle Helper
GNU General Public License v3.0 onlyUpdated