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IdA Public / Zellige-core
BSD 2-Clause "Simplified" LicenseUpdated -
Icy is an open community platform for bioimage informatics
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Bioimage Analysis / Spot Detector
GNU General Public License v3.0 onlySpot detector plugin for Icy
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Bioimage Analysis / Active Contour
GNU General Public License v3.0 onlyActive Contours plugin for Icy
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Bioimage Analysis / Spot Tracking
GNU General Public License v3.0 onlySpot Tracking plugin for Icy
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Bioimage Analysis / Track Manager
GNU General Public License v3.0 onlyTrack Manager plugin for Icy
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Bio-Formats library patched for Icy. The patch consist of replacing Apache Commons IO library by a newer version and also replacing org.json library with the custom version embedded into Micro-Manager to make it work properly.
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Bioimage Analysis / Plugin template
GNU General Public License v3.0 onlyTemplate to create new Icy plugin (POM file and base plugin class)
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Bioimage Analysis / Workbooks
GNU General Public License v3.0 onlyToolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software
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Bioimage Analysis / TensorFlow Manager
GNU General Public License v3.0 onlyThe TensorFlow library manager plugin. This plugin allows users to choose the TF version to be used on runtime
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GIPhy / AlienDiscover
GNU Affero General Public License v3.0Inferring alien oligonucleotides (adapters, primers, ...) from FASTQ file
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Bioimage Analysis / Blocks
GNU General Public License v3.0 onlyBlocks plugin for Icy. Also known as "Protocols SDK" This plugin provide interfaces to make plugin compatible with Protocols(Graphical Programming).
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Bioimage Analysis / Protocols
GNU General Public License v3.0 onlyProtocols (GUI part) plugin for Icy
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Bioimage Analysis / Sequence Blocks
GNU General Public License v3.0 onlySequence blocks plugin for Icy. This plugin deliver a set of Sequence tools to be used with Protocols (Graphical Programming).
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Bioimage Analysis / ROI blocks
GNU General Public License v3.0 onlyROI blocks plugin for Icy. This plugin deliver a set of ROI tools to be used with Protocols (Graphical Programming).
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Bioimage Analysis / Spot Tracking Blocks
GNU General Public License v3.0 onlySpot Tracking Blocks plugin for Icy. This plugin brings Spot Tracking tools into Protocols (Graphical Programming)
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Bioimage Analysis / Track Motion Profiler
GNU General Public License v3.0 onlyTrack Motion Profiler plugin for Icy. This plugin adds Motion Profiler and Motion Filter processors to Track Manager.
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