Explore projects

Running Jazayeri Simulations on Floelling Experiments

Scripts to inject attc cassette in genome for Integron_Finder analysis

Pipeline to run CMS in large-scale analyses

Pipeline to run CMS in large-scale analyses

Rapid Peptides Generator (RPG) is a software dedicated to predict proteases-induced cleavage sites on amino acid sequences.

https://rapid-peptide-generator.readthedocs.io

This package contains deep learning models and related scripts for RoseTTAFold

HUB transcriptomic snakemake pipeline

Region segmentation

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

ID-based RAG FastAPI: Integration with Langchain and PostgreSQL/pgvector

Quality-aware fastq demultiplexer. The goal is to demultiplex fastq files where the barcode is contained in the read at a known position.