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You can find here the HMM profiles and the macsyfinder models that was used in the paper Diversification of the type IV filament super-family into machines for adhesion, secretion, DNA transformation and motility.
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Bioimage Analysis / CS Denoising
GNU General Public License v3.0 onlyUpdated -
IAH public / bioimage_analysis_with_python_course
BSD 3-Clause "New" or "Revised" LicenseUpdated -
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Bioimage Analysis / JavaCPP library for Icy
GNU General Public License v3.0 onlyThe Bytedeco JavaCPP library for Icy
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Bioimage Analysis / Docker For Icy
GNU General Public License v3.0 onlyUpdated -
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This library contains the functions to convert TensorFlow 1 tensors into Icy sequences and viceversa. This library is compatible with TensorFlow versions up to 1.15
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Bioimage Analysis / Video Recorder
GNU General Public License v3.0 onlyUpdated -
GIPhy / FASTA2AGP
GNU Affero General Public License v3.0Creating an AGP file from a FASTA-formatted scaffold sequence file
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