GitLab

Spot detector plugin for Icy

legiolist deployment

Some scripts to plot results from my HTS pipelines.

Some wrappers for my snakemake HTS pipelines

Material for Diderot 2020-2021

Django based project to build metagenomics genes catalog

Some helpers for my HTS snakemake workflows.

Utilities to collapse reads in bam files to their 5' end

Toolbox to create and manipulate result tables with plug-ins and protocols, and export as text file or to your favorite spreadsheet software

SHAMAN is a SHiny application for Metagenomic ANalysis including the normalization, the differential analysis and mutiple visualization.

Template to create new Icy plugin (POM file and base plugin class)

Plugin Library used to provide autocompletion to JTextComponents, such as JTextArea or JTextField.

Provides 3D vector mathematics classes.

Track Manager plugin for Icy

It is a toy plugin to test semi-supervised texture segmentation using the new SLBPriu texture descriptor.