I use Jquery-ui autocompleter with jquery-ui smootheness style

for each strain i emit  keys for each words of 3 letters to 25 letters along the strain

add box to search by taxid

modify views by_replicon_taxid map to emit data nneede to display the tooltip in results

on index.html page ther is a field to search replicon by name.
the list of matches replicon is dispalyed under the search box.
each entry is a link 
the mouse over each link display a tooltip with some informations on the entry
click on the link open the corresponding secreton system page
if no thing is specified in the seach box all replicon are display (45 by 45) order by replicon name.

replace js loop on object by "traditional" js loop with an increment 

remove replion.html template which was split in 3 templates head / body / tail in subdirectory replicon

somewhere it was spelled with 2 l

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add index.js which use replicon.html to render list of secretion system as unordered list
add replicon.html a Mustache template to render an item of secretion system

modify view_by_name to be useable by index list
instaed returning  doc_id as value return an object with several fields which are used to display tooltips.

provide a schema of the genome whith the genes and their respective label.
and some controls 
 - left/right translation with a control panel
 - left/right by grabbing the paper
 - zoom in/out  with a control panel
 - zoom in/out with the mouswheel up/down
 
resize the view when the widow is resized

color each gene according to the "gene match" the gene match color chart is defined in color.css ( issue #872 )
constraint translation on Xaxis only ( issue #868 )

remove hard coded dbname (issue #863)