Dnabarcodesliteincorporation

Integration to DNABarcode R package of DNABarcodes R package reduced version (DNABarcodeLite).

The Check function on Rstudio generated the following log :

==> Rcpp::compileAttributes()

* Updated R/RcppExports.R

==> Rcmd.exe build dnabarcodecompatibility

* checking for file 'dnabarcodecompatibility/DESCRIPTION' ... OK
* preparing 'DNABarcodeCompatibility':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building 'DNABarcodeCompatibility_1.21.1.tar.gz'

==> Rcmd.exe check DNABarcodeCompatibility_1.21.1.tar.gz

* using log directory 'C:/Users/ctrebeau/Documents/DNABarcodeCompatibility.Rcheck'
* using R version 4.3.1 (2023-06-16 ucrt)
* using platform: x86_64-w64-mingw32 (64-bit)
* R was compiled by
    gcc.exe (GCC) 12.2.0
    GNU Fortran (GCC) 12.2.0
* running under: Windows 10 x64 (build 19045)
* using session charset: UTF-8
* checking for file 'DNABarcodeCompatibility/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DNABarcodeCompatibility' version '1.21.1'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DNABarcodeCompatibility' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 12.3.0'
* used C++ compiler: 'G__~1.EXE (GCC) 12.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... NOTE
Dépendance d'espace de nom dans le champ Imports non importé depuis : 'BH'
  All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'testthat.R' OK
* checking for unstated dependencies in vignettes ...
 OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ...
  'introduction.Rmd' using 'UTF-8'... OK
 OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE


R CMD check succeeded

The Clean-install function generated a successful output.