Commits · 6b908187f83dfb2f624c598561e03389981927c1 · iPPIDB / ippidb-web

Sep 21, 2017

install wget to be able to use ius release · 6b908187

Hervé MENAGER authored 7 years ago

otherwise, python35 isn't available.

Former-commit-id: 511827ca3ef06aea25788ec11e4bfcf776c1803d

6b908187

use python3.5 on ansible worker to deploy webserver · 6f0174cf

Hervé MENAGER authored 7 years ago

because ansible does not support python3.4 anymore, and this 
causes this on deployment:
https://github.com/ansible/ansible/issues/24180
Former-commit-id: 5448751bd777f3f2d9b60dea313cf8fa2305fedc

6f0174cf

Update ProteinDomainComplexTypeForm and ProteinDomainComplexForm files to get... · e2fe5cba

Rachel TORCHET authored 7 years ago

Update ProteinDomainComplexTypeForm and ProteinDomainComplexForm files to get specific forms according to the chosen architecture


Former-commit-id: e7c5d677765b0c2ed203f236ee7acc71d4896d0a

e2fe5cba

Sep 18, 2017
- Merge branch 'master' of https://gitlab.pasteur.fr/odoppelt/iPPIDB · dc0cf657
  Rachel TORCHET authored 7 years ago
  
  Former-commit-id: 373da52c055fcf2178af52becfc5e54e5d0e1f56
  dc0cf657
- save data to pass between ProteinDomainComplex(Type)Form in wizard · cf9c2ee3
  Rachel TORCHET authored 7 years ago
  
  Former-commit-id: f021cb531522fc7aa44570beefaaa81d906271a3
  cf9c2ee3
- remove commented CSS · 267e2157
  Rachel TORCHET authored 7 years ago
  
  Former-commit-id: d31037efc089c5aa9e39d14507f18091048f93d5
  267e2157
- correct typo · 346f271d
  Rachel TORCHET authored 7 years ago
  
  Former-commit-id: ab8510579bb3c1f003faa2f893e808df582479b2
  346f271d
Sep 14, 2017
- autopep8 code · c5fb2869
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: e4a2b89495247a4954b8046c445d85df5888f0b5
  c5fb2869
- correct small error in models code · a0c493d7
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 86cbfb7ecd83e8560695d670c9ed6cf9c67ebfe4
  a0c493d7
Sep 13, 2017
- dump database contents · 113f9246
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: d2b9daac9d7e5bb25b4d560e48bade4acdd7a39b
  113f9246
- correction to last edit of ansible script · 619ac0a0
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: b8dd51c1610f74716e143e9ca2335a5052f74691
  619ac0a0
- modify ansible script to set DJANGO settings at the top of file · 2729e2ac
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: fe649cab10820a40938455a39c8f2e8a8833182b
  2729e2ac
Sep 12, 2017
- minor correction to DJANGO_SETTINGS_MODULE ansible insertion · 1d45acae
  Hervé MENAGER authored 7 years ago
  
  insertafter does not work and is probably useless anyway Former-commit-id: cf751fe02bbf855e8cd495e7f79cfe66455decd8
  1d45acae
- add an ansible task to set DJANGO_SETTINGS_MODULE in wsgi handler script · d1b26248
  Hervé MENAGER authored 7 years ago
  
  this seems to be a shortcoming of mod_wsgi-express, which does not save this var from the call to a line such as: "./manage.py runmodwsgi --setup-only --settings=XXX" Former-commit-id: 082479fde709b689a38e670927c367f0af29ca73
  d1b26248
- gather facts in deploy.yaml to allow ansible_hostname in deployment · 223a9ac9
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: a47e82a49cdcfb1f8895dd1407195a7be2122a4c
  223a9ac9
- create a production settings file and correct ansible hostname var · a13c0a3b
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 07b27185b54b564746a13104391b2c0a2bea6bb1
  a13c0a3b
- test to add a host-specific django settings file · 6306e71c
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 2aa46231fbab9d901fe2060f2b7cea4fca580bd4
  6306e71c
- create or update schema for the db on ansible deployment · b2c5aacd
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 1d6b183e033698e06ceff44e08e8d843e7257f35
  b2c5aacd
Sep 11, 2017

add ID to protein ModelFormSet · 3a1fd078
Hervé MENAGER authored 7 years ago
```
Former-commit-id: a70e26e9f9a48f338a476d829cc938f3f61df264
```
3a1fd078

add required attribute to PDB id field in the wizard · 06454072

Hervé MENAGER authored 7 years ago

through an HTML attribute, which is the only working way within
the wizard, don't know why :(


Former-commit-id: 0b7bcba915c0582ce361df669215eec31cfbe0e5

06454072

Sep 09, 2017
- modify PDB ID form to validate format and PDB entry existence · 8cc2539d
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: fb0ff3428b6b55c4e73c58b186cf72d48b83f4d4
  8cc2539d
- add ws function to check if a PDB entry exists · 10c6f0d7
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 6d985f2167bda81cb08bad3b9cc5e4738a96e5a1
  10c6f0d7
- lowercase PDB code before to use ws request corresponding uniprot IDs · 7cd0b6ab
  Hervé MENAGER authored 7 years ago
  
  this is because EBI only accepts lowercase codes for PDB IDs Former-commit-id: 6aeeaf6323d627ff1e1728eefbddfafbdc86deb2
  7cd0b6ab
Aug 29, 2017
- Update front page with JavaScript function to enlarge infography/stats part :) · 79bc8235
  Rachel TORCHET authored 7 years ago
  
  Former-commit-id: e767b09bb90f1e3614b3524e8503f0cf4fb67bbf
  79bc8235
- Adding new pages to the website main structure · 7f29d4a9
  Rachel TORCHET authored 7 years ago
  
  Former-commit-id: 1a9e693823b7dfda2e5667449ff1b8e7c07fffa9
  7f29d4a9
Aug 07, 2017
- refactor ansible code between system and deploy playbooks · c5ba09a9
  Hervé MENAGER authored 7 years ago
  
  On the kind advice of Thomas Menard. Former-commit-id: c0b58e722b07bbcfc7d05fb756e06580a1b5ec11
  c5ba09a9
- add bioblend (required to talk with Galaxy) · 33c2dced
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 019d4b68e863e37cb20fe509e17c385c4b0a7fc2
  33c2dced
- restructure system.yaml ansible file · 21144dbb
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: a959420df90ee156872d7940ffd86faa5fac7bf9
  21144dbb
- more cleanup (unused ansible file) · 6192d7f3
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: c90b686f1d8d4a523bad01aef5653b4c3efa5ac4
  6192d7f3
- split ansible hosts files · 543d791c
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 05a19955744534c25396055729338eb672f7c6bc
  543d791c
- clean up the unused ansible files · c2403abf
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 7080aac1ae6e9afcd322057b075e4ec48a3a150b
  c2403abf
- use deploy_user_name var in deploy step · fc428003
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 40484ee771d49f464144b56d21d4bf37a9780fd4
  fc428003
Aug 05, 2017
- Update hosts to set specific ansible user · 6793dd24
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 62dd86f1efc989f517e1c06afb3f41ffd4ab7910
  6793dd24
- check who i am, ansible wip · 1d197276
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 6aaabc41a1f26eaade9c8a1544a0d84150761b71
  1d197276
- Update deploy.yaml · d047bb28
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 0fa6f9e111ef725b1260e26e8d791b8274a0b823
  d047bb28
- Update .gitlab-ci.yml · 58d1b839
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 8e9f80e5fc1f107213700e9dd16386ed5f3b21ae
  58d1b839
- ansible wip · 42e9bc58
  Hervé MENAGER authored 7 years ago
  
  Former-commit-id: 53715befb8b9dc36a5f79c90abcb6ddaf904108d
  42e9bc58
Aug 04, 2017

Change ProteinDomainComplexType form into a single form to deal with radio... · 50be08b9

Rachel TORCHET authored 7 years ago

Change ProteinDomainComplexType form into a single form to deal with radio button issues, and update html and javascript to show only one state : -Inhib or -Stab


Former-commit-id: 52d0d952d44957af32bfc79d60a746fea9b6fdfd

50be08b9

ansible WIP · f3502fc2
Hervé MENAGER authored 7 years ago
```
Former-commit-id: 5a62462e6cd81067743ce4ce671733e2d9a73aaf
```
f3502fc2
Update .gitlab-ci.yml · e57ad957
Hervé MENAGER authored 7 years ago
```
Former-commit-id: 562917ab10715eaa1b6d83b3d3e657d611b702e7
```
e57ad957