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  • 2.1
    6bdc780b · 2.1 ·
    Release: 2.1 
    JolyTree 2.1
  • 2.0
    9e4b47da · 2.0 · 
    + new F81/EI transformation formula using gamma shape parameter (option -a 1.5 by default)
+ option -f to to use the 4 nucleotide frequencies in F81/EI transformation; 
by default, to deal with multiple contig files, JolyTree sets f(A)=f(T)=0.5*(A+T)/(A+C+G+T) and f(C)=f(G)=0.5*(C+G)/(A+C+G+T)
+ option -s modified to specify sketch size as a fixed integer or as a proportion of the average genome size
  • 1.1b
    ad3aad90 · fixed return code when displaying doc ·
    Release: 1.1b
  • v1.1.181205ac
    b62cceaf · updating README ·