Commit 3debe216 authored by Alexis  CRISCUOLO's avatar Alexis CRISCUOLO
Browse files

v0.5

parent 5b5e683f
......@@ -86,7 +86,7 @@ Launch _wgetGenBankWGS_ without option to read the following documentation:
* The output file names are created with the organism name, followed by the intraspecific and isolate names (if any), and ending with the WGS master (is any) and the assembly accession. File extension depends on the file type specified using option -f.
* Flag "--T--" is added in the output file name when the corresponding assembly correspond to a type material. Flag "--t--" is added for putative type material that does not meet the full required criteria. Flag "--w--" is added as warning when some assembly anomalies are specified in the report file (for more details, see [https://www.ncbi.nlm.nih.gov/assembly/help/anomnotrefseq/](https://www.ncbi.nlm.nih.gov/assembly/help/anomnotrefseq/).
* Flag "--T--" is added in the output file name when the corresponding assembly correspond to a type material. Flag "--t--" is added for putative type material that does not meet the full required criteria. Flag "--w--" is added as warning when some assembly anomalies are specified in the report file (for more details, see [https://www.ncbi.nlm.nih.gov/assembly/help/anomnotrefseq/](https://www.ncbi.nlm.nih.gov/assembly/help/anomnotrefseq/)).
* After each usage, a file `summary.txt` containing the selected raw(s) of the GenBank or RefSeq tab-separated assembly report is written. If the option -n is not set, this file is completed by the name(s) of the written files (first column 'file').
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