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Amandine PERRIN
panacota
Commits
a360ce6e
Commit
a360ce6e
authored
5 years ago
by
Amandine PERRIN
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update import to new module name
parent
abd8ab87
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Pipeline
#35159
passed
5 years ago
Stage: test
Stage: coverage
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PanACoTA/subcommands/annotate.py
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PanACoTA/subcommands/annotate.py
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PanACoTA/subcommands/annotate.py
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View file @
a360ce6e
...
@@ -209,7 +209,7 @@ def main(cmd, list_file, db_path, res_dir, name, date, l90=100, nbcont=999, cutn
...
@@ -209,7 +209,7 @@ def main(cmd, list_file, db_path, res_dir, name, date, l90=100, nbcont=999, cutn
import
shutil
import
shutil
import
logging
import
logging
from
PanACoTA.annotate_module
import
genome_seq_functions
as
gfunc
from
PanACoTA.annotate_module
import
genome_seq_functions
as
gfunc
from
PanACoTA.annotate_module
import
prokka_prodigal
_functions
as
pfunc
from
PanACoTA.annotate_module
import
annotation
_functions
as
pfunc
from
PanACoTA.annotate_module
import
general_format_functions
as
ffunc
from
PanACoTA.annotate_module
import
general_format_functions
as
ffunc
from
PanACoTA
import
utils
from
PanACoTA
import
utils
from
PanACoTA
import
__version__
as
version
from
PanACoTA
import
__version__
as
version
...
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