Skip to content
Snippets Groups Projects
Commit af2a69f1 authored by Amandine  PERRIN's avatar Amandine PERRIN
Browse files

install fixed version of blast+: 2.10.1

parent 8eba8172
No related branches found
No related tags found
No related merge requests found
...@@ -21,9 +21,9 @@ RUN apt-get install -y \ ...@@ -21,9 +21,9 @@ RUN apt-get install -y \
RUN pip3 install --upgrade pip RUN pip3 install --upgrade pip
# Update makeblastdb and blastp for prokka # Update makeblastdb and blastp for prokka, with blast+ version 2.10.1
WORKDIR /install-dir WORKDIR /install-dir
RUN wget ftp://ftp.ncbi.nlm.nih.gov/blast/executables/LATEST/ncbi-blast-2.10.1+-x64-linux.tar.gz &&\ RUN wget ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.10.1/ncbi-blast-2.10.1+-x64-linux.tar.gz &&\
tar zxvpf ncbi-blast-2.10.1+-x64-linux.tar.gz &&\ tar zxvpf ncbi-blast-2.10.1+-x64-linux.tar.gz &&\
cp /install-dir/ncbi-blast-2.10.1+/bin/makeblastdb /usr/local/bin/ &&\ cp /install-dir/ncbi-blast-2.10.1+/bin/makeblastdb /usr/local/bin/ &&\
cp /install-dir/ncbi-blast-2.10.1+/bin/blastp /usr/local/bin/ &&\ cp /install-dir/ncbi-blast-2.10.1+/bin/blastp /usr/local/bin/ &&\
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment