Build image with prokka and quicktree with the appropriate name

.gitlab-ci.yml

@@ -9,62 +9,62 @@ variables:
 before_script:
   - docker login -u gitlab-ci-token -p "$CI_BUILD_TOKEN" registry-gitlab.pasteur.fr
 
-build-test-image:
-  only:
-    - docker
-  stage: build
-  script:
-    - apk update ; apk add git
-    - git checkout master -- requirements.txt
-    - docker build --pull -t "$CI_REGISTRY_IMAGE/testing-ubuntu" for_tests
-    - docker push "$CI_REGISTRY_IMAGE/testing-ubuntu"
+# build-test-image:
+#   only:
+#     - docker
+#   stage: build
+#   script:
+#     - apk update ; apk add git
+#     - git checkout master -- requirements.txt
+#     - docker build --pull -t "$CI_REGISTRY_IMAGE/testing-ubuntu" for_tests
+#     - docker push "$CI_REGISTRY_IMAGE/testing-ubuntu"
 
-build-install-barrnap:
-  only:
-    - docker
-  stage: build
-  script:
-    - apk update ; apk add git
-    - git checkout master -- requirements.txt
-    - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly" for_build/barrnap_only
-    - docker push "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly"
+# build-install-barrnap:
+#   only:
+#     - docker
+#   stage: build
+#   script:
+#     - apk update ; apk add git
+#     - git checkout master -- requirements.txt
+#     - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly" for_build/barrnap_only
+#     - docker push "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly"
 
-build-install-annote-and-fastme:
+build-install-annote-and-quicktree:
   only:
     - docker
   stage: build
   script:
     - apk update ; apk add git
     - git checkout master -- requirements.txt
-    - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-annote-fastme" for_build/annote_and_1tree
-    - docker push "$CI_REGISTRY_IMAGE/install-ubuntu-annote-fastme"
+    - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-annote-quicktree" for_build/annote_and_1tree
+    - docker push "$CI_REGISTRY_IMAGE/install-ubuntu-annote-quicktree"
 
-build-ubuntu:
-  only:
-    - docker
-  stage: build
-  script:
-    - apk update ; apk add git
-    - git checkout master -- requirements.txt
-    - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu" for_build/ubuntu
-    - docker push "$CI_REGISTRY_IMAGE/install-ubuntu"
+# build-ubuntu:
+#   only:
+#     - docker
+#   stage: build
+#   script:
+#     - apk update ; apk add git
+#     - git checkout master -- requirements.txt
+#     - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu" for_build/ubuntu
+#     - docker push "$CI_REGISTRY_IMAGE/install-ubuntu"
 
-build-mafft:
-  only:
-    - docker
-  stage: build
-  script:
-    - apk update ; apk add git
-    - git checkout master -- requirements.txt
-    - docker build --pull -t "$CI_REGISTRY_IMAGE/install-mafft" for_build/mafft
-    - docker push "$CI_REGISTRY_IMAGE/install-mafft"
+# build-mafft:
+#   only:
+#     - docker
+#   stage: build
+#   script:
+#     - apk update ; apk add git
+#     - git checkout master -- requirements.txt
+#     - docker build --pull -t "$CI_REGISTRY_IMAGE/install-mafft" for_build/mafft
+#     - docker push "$CI_REGISTRY_IMAGE/install-mafft"
 
-build-mmseqs_and_fastme:
-  only:
-    - docker
-  stage: build
-  script:
-    - apk update ; apk add git
-    - git checkout master -- requirements.txt
-    - docker build --pull -t "$CI_REGISTRY_IMAGE/install-mmseqs-fastme" for_build/mmseqs_and_fastme
-    - docker push "$CI_REGISTRY_IMAGE/install-mmseqs-fastme"
+# build-mmseqs_and_fastme:
+#   only:
+#     - docker
+#   stage: build
+#   script:
+#     - apk update ; apk add git
+#     - git checkout master -- requirements.txt
+#     - docker build --pull -t "$CI_REGISTRY_IMAGE/install-mmseqs-fastme" for_build/mmseqs_and_fastme
+#     - docker push "$CI_REGISTRY_IMAGE/install-mmseqs-fastme"