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Commit bea7f18e authored by Amandine  PERRIN's avatar Amandine PERRIN
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Build image with prokka and quicktree with the appropriate name

parent e238e541
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...@@ -9,62 +9,62 @@ variables: ...@@ -9,62 +9,62 @@ variables:
before_script: before_script:
- docker login -u gitlab-ci-token -p "$CI_BUILD_TOKEN" registry-gitlab.pasteur.fr - docker login -u gitlab-ci-token -p "$CI_BUILD_TOKEN" registry-gitlab.pasteur.fr
build-test-image: # build-test-image:
only: # only:
- docker # - docker
stage: build # stage: build
script: # script:
- apk update ; apk add git # - apk update ; apk add git
- git checkout master -- requirements.txt # - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/testing-ubuntu" for_tests # - docker build --pull -t "$CI_REGISTRY_IMAGE/testing-ubuntu" for_tests
- docker push "$CI_REGISTRY_IMAGE/testing-ubuntu" # - docker push "$CI_REGISTRY_IMAGE/testing-ubuntu"
build-install-barrnap: # build-install-barrnap:
only: # only:
- docker # - docker
stage: build # stage: build
script: # script:
- apk update ; apk add git # - apk update ; apk add git
- git checkout master -- requirements.txt # - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly" for_build/barrnap_only # - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly" for_build/barrnap_only
- docker push "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly" # - docker push "$CI_REGISTRY_IMAGE/install-ubuntu-barrnaponly"
build-install-annote-and-fastme: build-install-annote-and-quicktree:
only: only:
- docker - docker
stage: build stage: build
script: script:
- apk update ; apk add git - apk update ; apk add git
- git checkout master -- requirements.txt - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-annote-fastme" for_build/annote_and_1tree - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu-annote-quicktree" for_build/annote_and_1tree
- docker push "$CI_REGISTRY_IMAGE/install-ubuntu-annote-fastme" - docker push "$CI_REGISTRY_IMAGE/install-ubuntu-annote-quicktree"
build-ubuntu: # build-ubuntu:
only: # only:
- docker # - docker
stage: build # stage: build
script: # script:
- apk update ; apk add git # - apk update ; apk add git
- git checkout master -- requirements.txt # - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu" for_build/ubuntu # - docker build --pull -t "$CI_REGISTRY_IMAGE/install-ubuntu" for_build/ubuntu
- docker push "$CI_REGISTRY_IMAGE/install-ubuntu" # - docker push "$CI_REGISTRY_IMAGE/install-ubuntu"
build-mafft: # build-mafft:
only: # only:
- docker # - docker
stage: build # stage: build
script: # script:
- apk update ; apk add git # - apk update ; apk add git
- git checkout master -- requirements.txt # - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/install-mafft" for_build/mafft # - docker build --pull -t "$CI_REGISTRY_IMAGE/install-mafft" for_build/mafft
- docker push "$CI_REGISTRY_IMAGE/install-mafft" # - docker push "$CI_REGISTRY_IMAGE/install-mafft"
build-mmseqs_and_fastme: # build-mmseqs_and_fastme:
only: # only:
- docker # - docker
stage: build # stage: build
script: # script:
- apk update ; apk add git # - apk update ; apk add git
- git checkout master -- requirements.txt # - git checkout master -- requirements.txt
- docker build --pull -t "$CI_REGISTRY_IMAGE/install-mmseqs-fastme" for_build/mmseqs_and_fastme # - docker build --pull -t "$CI_REGISTRY_IMAGE/install-mmseqs-fastme" for_build/mmseqs_and_fastme
- docker push "$CI_REGISTRY_IMAGE/install-mmseqs-fastme" # - docker push "$CI_REGISTRY_IMAGE/install-mmseqs-fastme"
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