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c7a79854

Commit c7a79854 authored 6 years ago by Amandine PERRIN

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add option small:

if contigs are less than 20000bp and user wants to annotate with prodigal, add -p meta to the command line launching prodigal

parent 93ed9871

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PanACoTA/annotate_module/general_format_functions.py 4 additions, 4 deletions

PanACoTA/annotate_module/general_format_functions.py
PanACoTA/annotate_module/prokka_prodigal_functions.py 16 additions, 23 deletions

PanACoTA/annotate_module/prokka_prodigal_functions.py
PanACoTA/subcommands/annotate.py 13 additions, 6 deletions

PanACoTA/subcommands/annotate.py
PanACoTA/utils.py 5 additions, 4 deletions

PanACoTA/utils.py

with 38 additions and 37 deletions

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