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Commit d87db16d authored by Amandine PERRIN's avatar Amandine PERRIN
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Less 'RUN' steps for annote-quicktree image

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...@@ -20,10 +20,10 @@ RUN apt-get install -y\ ...@@ -20,10 +20,10 @@ RUN apt-get install -y\
libdigest-md5-perl \ libdigest-md5-perl \
git \ git \
default-jre \ default-jre \
bioperl bioperl &&\
RUN git clone https://github.com/tseemann/prokka.git git clone https://github.com/tseemann/prokka.git &&\
RUN /tmp/prokka/bin/prokka --setupdb /tmp/prokka/bin/prokka --setupdb &&\
RUN ln -s /tmp/prokka/bin/prokka /usr/local/bin ln -s /tmp/prokka/bin/prokka /usr/local/bin
RUN rm /usr/bin/mafft # remove mafft installed with bioperl RUN rm /usr/bin/mafft # remove mafft installed with bioperl
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