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Tensorflow 1 Interface

License: GPL v3 Twitter Image.sc forum

This library contains the functions to convert TensorFlow 1 tensors into Icy sequences and viceversa. This library is compatible with TensorFlow versions up to 1.15. This repository also proposes this functionalities as a plugin for the bioimage analysis software Icy, which was developed by members or former members of the Biological Image Analysis unit at Institut Pasteur. This plugin is licensed under GPL3 license.

Icy is developed and maintained by Biological Image Analysis unit at Institut Pasteur. The source code of Icy is also licensed under a GPL3 license.

Plugin description

Convert Images and sequences into Tensors easier with this library plugin. Version compatible with TensorFlow up to 1.15

A more detailed user documentation can be found on the TensorFlow 1 Interface documentation page on the Icy website: http://icy.bioimageanalysis.org/plugin/tensorflow-1-interface/

Installation instructions

For end-users, refer to the documentation on the Icy website on how to install an Icy plugin.

For developers, see our Contributing guidelines and Code of Conduct.

Main functions and usage

Classname: plugins.danyfel80.tensorflow.v1.TensorFlow1Interface

To convert images and sequences into tensors you can use the class org.bioimageanalysis.icy.tensorflow.v1.tensor.TensorBuilder.

To do the inverse process use the respective classes:

  • org.bioimageanalysis.icy.tensorflow.v1.tensor.IcyBufferedImageBuilder
  • org.bioimageanalysis.icy.tensorflow.v1.tensor.SequenceBuilder

Citation

Please cite this plugins as follows:

There is no associated publication for this plugin.

http://icy.bioimageanalysis.org

Author(s)

Daniel Felipe Gonzalez Obando dgonzale@pasteur.fr

Additional information