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bis-aria
ariaec
Commits
f31ff4be
Commit
f31ff4be
authored
Jan 21, 2016
by
fabrice
Browse files
Bug fixe: save_fig flag doesn't work with refmaplot
parent
cff3bc2a
Changes
7
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ariaec/conf/aria_ec.ini
View file @
f31ff4be
...
...
@@ -126,7 +126,7 @@ whatif_executable: whatif
; Plot settings
n_factor:
1.5
groupby_method:
min
save_fig:
Tru
e
save_fig:
Fals
e
size_fig:
10
plot_ext:
pdf
plot_dpi:
200
...
...
ariaec/econverter.pyc
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f31ff4be
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ariaec/maplot.py
View file @
f31ff4be
...
...
@@ -89,9 +89,10 @@ class AriaEcContactMap(object):
if
mapt
==
self
.
reftype
:
refmap
.
write_contacts
(
"_"
.
join
((
self
.
outprefix
,
mapt
)),
outdir
=
outdir
)
refmap
.
saveplot
(
outdir
=
outdir
,
outprefix
=
"_"
.
join
((
self
.
outprefix
,
mapt
)),
**
plotparams
)
if
self
.
settings
.
contactmap
.
config
.
get
(
"save_fig"
):
refmap
.
saveplot
(
outdir
=
outdir
,
outprefix
=
"_"
.
join
((
self
.
outprefix
,
mapt
)),
**
plotparams
)
continue
if
self
.
allresmap
[
mapt
].
get
(
"contactmap"
)
is
not
None
and
\
...
...
ariaec/maplot.pyc
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f31ff4be
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ariaec/protein.pyc
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f31ff4be
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ariaec/protmap.py
View file @
f31ff4be
...
...
@@ -16,8 +16,6 @@ import operator
import
pandas
as
pd
import
seaborn
as
sns
import
numpy
as
np
import
matplotlib
matplotlib
.
use
(
'pdf'
)
import
matplotlib.pyplot
as
plt
import
aria.ConversionTable
as
ConversionTable
import
aria.legacy.AminoAcid
as
AminoAcid
...
...
ariaec/protmap.pyc
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f31ff4be
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