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Blaise LI
bioinfo_utils
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1d91b2cc
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1d91b2cc
authored
May 13, 2019
by
Blaise Li
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Cosmetics in docstrings.
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5e09e511
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bam25prime/Python/bam25prime/bam25prime.py
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1d91b2cc
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@@ -117,12 +117,12 @@ def collapse_and_sort(alis):
...
@@ -117,12 +117,12 @@ def collapse_and_sort(alis):
"""
"""
Collapse elements from *alis* to their 5 prime end.
Collapse elements from *alis* to their 5 prime end.
The resulting :class:`pybedtool.BedTool` is sorted.
The resulting :class:`pybedtool
s
.BedTool` is sorted.
:param alis: An iterable of :class:`pysam.AlignedSegment`
:param alis: An iterable of :class:`pysam.AlignedSegment`
:rtype: :class:`pybedtool.BedTool`
:rtype: :class:`pybedtool
s
.BedTool`
:class:`pybedtool.BedTool` is an iterable:
:class:`pybedtool
s
.BedTool` is an iterable:
It can be iterated over in a for loop, or produce an iterator
It can be iterated over in a for loop, or produce an iterator
using :func:`iter` on it
using :func:`iter` on it
(see https://stackoverflow.com/a/28353158/1878788).
(see https://stackoverflow.com/a/28353158/1878788).
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