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Blaise LI
bioinfo_utils
Commits
27e84e63
Commit
27e84e63
authored
Jul 06, 2021
by
Blaise Li
Browse files
Fix warning.
parent
b9cbedec
Changes
1
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RNA_Seq_Cecere/RNA-seq.snakefile
View file @
27e84e63
...
...
@@ -1638,7 +1638,7 @@ rule test_size_factor:
by_norm = counts_data / size_factors
data = np.log10(by_norm[counts_data.prod(axis=1) > 0])
if np.isfinite(data).any().any():
warn("Data contains invalid values:
",
str(data))
warn(
f
"Data contains invalid values:
{
str(data)
}"
)
try:
xlabel = "log10(normalized counts)"
save_plot(pp, plot_counts_distribution, data, xlabel,
...
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