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Blaise LI
bioinfo_utils
Commits
d817a7ef
Commit
d817a7ef
authored
Feb 14, 2022
by
Blaise Li
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Typo in singularity Makefile.
This resulted in a wrong symbolic link in the container.
parent
9f0e5657
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singularity/Makefile
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d817a7ef
...
@@ -11,7 +11,7 @@ install: run_pipeline run_pipeline.sh workflows_shell.sh
...
@@ -11,7 +11,7 @@ install: run_pipeline run_pipeline.sh workflows_shell.sh
install
run_pipeline
$(
PREFIX
)
_
$(
VERSION
)
/bin/.
install
run_pipeline
$(
PREFIX
)
_
$(
VERSION
)
/bin/.
install
run_pipeline.sh
$(
PREFIX
)
_
$(
VERSION
)
/bin/.
install
run_pipeline.sh
$(
PREFIX
)
_
$(
VERSION
)
/bin/.
install
workflows_shell.sh
$(
PREFIX
)
_
$(
VERSION
)
/bin/.
install
workflows_shell.sh
$(
PREFIX
)
_
$(
VERSION
)
/bin/.
for
datatype
in
sRNA-seq smallRNA-seq RNA-seq GRO-seq PRO-seq Degradome-seq Ribo-seq iCLIP-seq iCLIP
;
\
for
datatype
in
sRNA-seq small
_
RNA-seq RNA-seq GRO-seq PRO-seq Degradome-seq Ribo-seq iCLIP-seq iCLIP
;
\
do
\
do
\
ln
-sf
$(
PREFIX
)
_
$(
VERSION
)
/bin/run_pipeline.sh
$(
PREFIX
)
_
$(
VERSION
)
/bin/run_
$${
datatype
}
_pipeline
;
\
ln
-sf
$(
PREFIX
)
_
$(
VERSION
)
/bin/run_pipeline.sh
$(
PREFIX
)
_
$(
VERSION
)
/bin/run_
$${
datatype
}
_pipeline
;
\
done
done
...
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