Commit 1e3695f8 authored by Blaise Li's avatar Blaise Li
Browse files

Merge branch 'master' of gitlab.pasteur.fr:bli/libhts

parents 571fae24 2afd8597
......@@ -31,6 +31,7 @@ function error_exit
samtools --version
SAM=${1}
echo "Will sort and index ${SAM}"
case ${SAM} in
*.sam)
......
......@@ -28,7 +28,7 @@ setup(
"numpy",
"pandas",
"pyBigWig",
"pybedtools",
"pybedtools @ git+https://github.com/blaiseli/pybedtools.git@fix_missing_headers",
"scipy",
"seaborn"],
# specific versions and index would rather belong to requirements.txt
......
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