Skip to content
Snippets Groups Projects
Select Git revision
  • master default protected
1 result
You can move around the graph by using the arrow keys.
Created with Raphaël 2.2.023Apr28Feb23221085215Jan28Feb2431Jan3018Oct179Jul27Jun5More data tables output by plot functions.mastermasterReturn plotted data in some plot functions.Speeding up table averaging.Still trying to avoid NaNs.Try to avoid NaNs due to empty reads files.Wrong parenthesis placement. Hide unused imports.Only allow same alphabet when merging read stats.Fixing counts table access.ignore letters not in alphabet.Tolerate longer sequences.Try to avoid NaNs in scaled proportions.Y-scale according to data for scaled proportions.Wrong axis for data frame division.Transpose tables.CamelCasing DataFrame.Fix table parsing.Add plot functions for proportions.Composition table merging is now sum.Add minimum read length in bam2fastq.More diagnostics for read size issues.More diagnostics when read too long.Convert map to list because length is needed.Add static method to pre-set alphabet and max_len.Add a ReadStats object.Fix composition averaging, more alphabet tweaking.Maximum read length and out files not mandatory.Add function to merge read stats.Change cythonized library name to bam2fq.More code factored in libreads.Adding licence.Fixing yticklabels.Trying to plot "mirror" logos.Can set title to read composition graphs.PEP 518 build isolation fails.Added cythonized fastq extractor.Use more generic python version to install.Added functions to plot read composition.Added total read counts as stat.Adding .gitignore.Added README with install instructions.