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  1. Feb 24, 2020
  2. Sep 16, 2019
  3. Nov 12, 2018
  4. Apr 11, 2018
    • Blaise Li's avatar
      Fixing libraries to have multiple users. · 0bbf99a7
      Blaise Li authored
      Also removed some debugging output that was written in a unique file in
      /tmp, which prevented the small RNA annotation to be performed by a new
      user without erasing this file.
      0bbf99a7
  5. Jan 30, 2017
    • Blaise Li's avatar
      Parallel version using Pool.imap_unordered. · 628a7fb4
      Blaise Li authored
      The small RNA reads are transmitted via a Queue in fastq format to a
      function that writes them to a file.
      
      To avoid wasting too much time in interprocess communication, the
      annotation generator is buffered, and counting functions that work on
      these buffers of annotation information are now used.
      
      These functions have to be imported from libsmallrna in order to be
      picklable (for multiprocessing) under cProfiling.
      628a7fb4
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