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Commit a6a8d82c authored by Blaise Li's avatar Blaise Li
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Increase memory limit for some commands.

parent 3230409c
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...@@ -54,12 +54,12 @@ count_fastq_reads() ...@@ -54,12 +54,12 @@ count_fastq_reads()
sort_by_seq() sort_by_seq()
{{ {{
niceload --mem 500M fastq-sort -s || error_exit "fastq-sort failed" niceload --mem 10000M fastq-sort -s || error_exit "fastq-sort failed"
}} }}
dedup() dedup()
{{ {{
sort_by_seq | niceload --mem 500M remove-duplicates-from-sorted-fastq \\ sort_by_seq | niceload --mem 10000M remove-duplicates-from-sorted-fastq \\
|| error_exit "remove_duplicates_from_sorted_fastq failed" || error_exit "remove_duplicates_from_sorted_fastq failed"
}} }}
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