Skip to content
Snippets Groups Projects
Commit 131e2618 authored by Blaise Li's avatar Blaise Li
Browse files

More curly braces.

parent 0c17b301
No related branches found
No related tags found
No related merge requests found
...@@ -55,6 +55,6 @@ if hasattr(snakemake.output, "methods"): ...@@ -55,6 +55,6 @@ if hasattr(snakemake.output, "methods"):
shell(f"cp {snakemake.input.methods} {snakemake.output.methods}") shell(f"cp {snakemake.input.methods} {snakemake.output.methods}")
methods = f"The {snakemake.params.read_name} were mapped on the {snakemake.params.genome_name} using {snakemake.params.aligner} (version ${{{{v}}}}) with options {snakemake.params.settings}" methods = f"The {snakemake.params.read_name} were mapped on the {snakemake.params.genome_name} using {snakemake.params.aligner} (version ${{{{v}}}}) with options {snakemake.params.settings}"
shell(f""" shell(f"""
v=$({snakemake.params.aligner} --version | head -1 | awk '{{print $3}}') v=$({snakemake.params.aligner} --version | head -1 | awk '{{{{print $3}}}}')
echo "{methods}" >> {snakemake.output.methods} echo "{methods}" >> {snakemake.output.methods}
""") """)
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment