Explore projects
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4DUnit / Tracked-nuclear neighbor analyzer
BSD 3-Clause "New" or "Revised" LicenseUpdated -
Gaëlle LETORT / DeXtrusion
BSD 3-Clause "New" or "Revised" LicenseAutomatic detection of epithelial cell events as cell extrusion
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IAH public / LPS-induced systemic inflammation affects the dynamic interactions of astrocytes and microglia with the vasculature of the mouse brain cortex
BSD 3-Clause "New" or "Revised" LicenseUpdated -
gem / spot_ICE
GNU General Public License v3.0 onlyscript that makes a visual representation of a spot containing ICE.
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Statistical-Genetics / jass
MIT LicenseA web interface for the Joint Analysis of GWAS Summary Statistics.
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Gaëlle LETORT / EpiCure
BSD 3-Clause "New" or "Revised" LicenseNapari plugin to ease manual correction of epithelial movie segmentation
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The impact of genetic diversity on gene essentiality within the E. coli species
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Remote bio-image analysis course with python. Website: https://iah-public.pages.pasteur.fr/20241008_remote_python_bioimage_analysis_course_day2
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Mohamed Mounib BENIMAM / SplineDist
GNU General Public License v3.0 or laterPytorch implementation of the Spline dist cell segmentation method
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IAH public / bioimage_analysis_with_python_course
BSD 3-Clause "New" or "Revised" LicenseUpdated -
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Metagenomics / FastGenes
MIT LicenseFrom experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM
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