Explore projects

Individual-based model of P. vivax transmission

This repository is tied to project #17289 submitted by Prof. Anna-Bella Failloux. It will host all the developments around that project to help replicate the results from the article.

Git repository to host The PvSeroTAT RShiny app. This app provides a user-friendly interface to apply classification algorithms to detect recent infections by Plasmodium vivax, as detailed in the recent paper by Longley et al. (https://doi.org/10.1038/s41591-020-0841-4)

Pipeline to run CMS in large-scale analyses

A nextflow pipeline to analyze GWAS Summary Statistics with JASS. The pipeline execute:

clean and harmonize data with jass_preprocessing if specified impute data with RAISS create input data for JASS analyse group of trait with jass

A python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium

LIANA: a LIgand-receptor ANalysis frAmework

Source of the shiny server that presents results obtained by large scale double mutant yeast screens (GIM): http://hub05.hosting.pasteur.fr/GIM_interactions/