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ROI Statistics plugin for Icy

Serratus project, read downloader using AWS Batch

building a minimal image based on Ubuntu LTS 18.04 for CI (based on the singularity recipe at https://gitlab.pasteur.fr/tru/ubuntu-lts18.04-maestro)

building a miniconda minimal image based on Ubuntu LTS 18.04 for CI

Translating the maximum number of codons using the minimum number of ORFs

A plugin allowing to create a graphic showing the intensity profile of 2D ROIs

Asia-Pacific ICEMER cohort ran in Madang (Papua New-Guinea) in early 2020. The purpose of this repository is to centralize R scripts and developments to streamline the data extraction and analysis.

Sero-prevalence estimates for human coronaviruses

The scripts for the GaLoPA pipeline

Some helpers for my HTS snakemake workflows.