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random files to ease the use of CentOS locally

Project Testing for the Core-Genome EPA scripts

Checking for problems with dependencies, code bugs, and other problems that might have been unseen

SMARTdenovo assembly tool wrapped into a singularity for HPC cluster executions

Fiji plugin to register 3D movies and tracks of cells moving on fiber imaged in transmitted light.

openbabel rpm recipes for iPPI-DB. 2.4.1 is too old and buggy on fingerprints and tanimoto, so until the next release we use custom rpms

Intensity projection plugin. It does intensity project along depth or time with multiple algorithms: mean, max, median, variance, standard deviation, saturated sum. Projection can also be restricted to ROI.

Embed CPython in Java through JNI

Codes and Data for the paper “SARS-CoV-2 IgG seroprevalence surveys in blood donors before the vaccination campaign, France 2020-2021”.

Some experiments with parallel and functional programming.

scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)

Estimating Genome Medoid

Code and data for the article by Paireau et al. "An ensemble model based on early predictors to forecast COVID-19 healthcare demand in France"