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This project is dedicated to protocol blocks generating random objects:

doubles integers subimages

Multiple Sequence Alignment shrinking

Sequence blocks plugin for Icy. This plugin deliver a set of Sequence tools to be used with Protocols (Graphical Programming).

This project contains icy utilitary var classes to help protocol creation.

imglib2-icy ImgLib2 wrappers for Icy.

A Fiji tool to detect, track and analyze cell-to-cell contacts.

First reported in Samassa et al., 2020, "Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and TCR vesicular trafficking"

Local z-projection via the determination of a plane of reference.

The Oshi core library (JDK6) for Icy

https://github.com/oshi/oshi

Import Matlab *.mat files as sequences in Icy

Java3D library for Icy

Cropping reads to reach homogeneous composition among positions

Manage a list of ROIs that the user can store and pop back in one click.