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Biodiversity and Epidemiology of Bacterial Pathogens / CGprofiler
GNU General Public License v3.0 or laterUpdated -
IdA Public / DNABarcodeCompatibility
GNU General Public License v2.0 or laterUpdated -
Bioimage Analysis / Icy / Extensions / ROI Pool
GNU General Public License v3.0 onlyManage a list of ROIs that the user can store and pop back in one click.
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imod / Laser control for QuickPALM
GNU General Public License v3.0 onlyPython GUI to control an AOTF.
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GIPhy / JolyTree
GNU Affero General Public License v3.0Fast distance-based phylogenetic inference from unaligned genome sequences
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View Clostridioides difficile binary toxin CDT induces biofilm-like persisting microcolonies project
IAH public / Clostridioides difficile binary toxin CDT induces biofilm-like persisting microcolonies
Python code for the image analysis performed for the paper
"Clostridioides difficile binary toxin CDT induces biofilm-like persisting microcolonies" J. MEZA TORRES et al.
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Bioimage Analysis / Icy / Extensions / Elevation Map
GNU General Public License v3.0 onlyUpdated -
GIPhy / TreeCons
GNU Affero General Public License v3.0majority-rule consensus of ML phylogenetic trees
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Bioimage Analysis / Micro-Manager Blocks
GNU General Public License v3.0 onlyBlocks (Protocols) for Micro-Manager plugin
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Bioimage Analysis / Icy / Extensions / RSyntaxTextArea for Icy
GNU General Public License v3.0 onlyRSyntaxTextArea library for Icy. Badically it provides a TextArea component with syntax highlight for different languages.
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