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MetroloSPIM plugin for Icy

https://hub.pages.pasteur.fr/shiny-k8s/

This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522

The scripts for the GaLoPA pipeline

Singularity to wrap minimap2 and miniasm in order to perform a long read de novo assembly

Some helpers to call DESeq2 using rpy2 in python.

General purpose image analysis filters in python

Finding Repeats Using BLAST