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Pipeline to run CMS in large-scale analyses

TopSpin on CentOs-7

MeRIP-Seq pipeline analysis for m6a methylation site detection Author: Christophe Bécavin, Hub Bioinformatic and Biostatistic, Institut Pasteur

A wrapper for the canu long read assembly tool

This contains the minimal necessary codes to reproduce the results from the manuscript "Invariant non-equilibrium promoter switching dynamics optimizes information flow in eukaryotes".

Estimating pairwise OGRIs between genomes (ANI, AAI, POCP, ...)

building a miniconda minimal image based on Ubuntu LTS 18.04 for CI

This repository contains all the scripts used for the development of core genome MLST schemes for Klebsiella pneumoniae sensu stricto and two of its sublineages SL147 and SL307.

Pasteur Course on Integrative Structural Biology (ISB2017)

http://bbrancot.pages.pasteur.fr/django-course

Creating figures showing linear maps between genomes