Explore projects
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GIPhy / RepeatPlot
GNU Affero General Public License v3.0creating figures that represent the positions of long repeats in a chromosome
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Quang tru HUYNH / docker-ubuntu-lts18.04-maestro-ci
GNU General Public License v3.0 onlybuilding a minimal image based on Ubuntu LTS 18.04 for CI (based on the singularity recipe at https://gitlab.pasteur.fr/tru/ubuntu-lts18.04-maestro)
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Quang tru HUYNH / docker-ubuntu-lts18.04-miniconda-ci
GNU General Public License v3.0 onlybuilding a miniconda minimal image based on Ubuntu LTS 18.04 for CI
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Gael MILLOT / micmac
GNU General Public License v3.0 or laterUpdated -
Bioimage Analysis / Icy / Extensions / Connected Components
GNU General Public License v3.0 onlyThis plugin extracts groups of connected pixels in 2D and 3D based on their intensity and that of the background. Works on both binary and gray-scale data. Output can be pushed to the swimming pool for other plug-ins to further exploi
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Nyx / LarvaTagger.jl
MIT License2D viewer for behaving larvae, with manual and automatic behavior tagging capabilities
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Diogo BORGES LIMA / CombineTDP_BUP_data
GNU General Public License v3.0 onlySoftware capable of combine top-down and bottom-up proteomics data.
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GIPhy / GenoLayout
GNU Affero General Public License v3.0Creating figures showing linear maps between genomes
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Quang tru HUYNH / catgumag-alphafold
Apache License 2.0Updated -
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Bioimage Analysis / JOCL
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / SLIC - SuperPixels
GNU General Public License v3.0 onlySLIC: Simple Linear Iterative Clustering
An Icy plugin implementing this popular segmentation technique
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bis / acarre-EnvPasteur-micromamba
GNU General Public License v3.0 or laterUpdated -
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Metagenomics / metagenedb
MIT LicenseDjango based project to build metagenomics genes catalog
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Bioimage Analysis / Distance Transforms
GNU General Public License v3.0 onlyDistance Transforms Plugin for Icy
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The impact of genetic diversity on gene essentiality within the E. coli species
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