Explore projects
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Quang tru HUYNH / docker-centos7-tensorflow
GNU General Public License v3.0 onlydocker image to build tensorflow on CentOS-7 x86_64
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Quang tru HUYNH / docker-miniconda3-jupyter
GNU General Public License v3.0 or laterUpdated -
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Bioimage Analysis / Rigid Registration
GNU General Public License v3.0 onlyA simple tool to correct chromatic shifts as well as temporal drift (including translations and rotations), based on spectral correlation.
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Bioimage Analysis / ROI intensity evolution
GNU General Public License v3.0 onlyCompute and display the intensity evolution for regions of interests (ROIs) through time. Results can be refreshed automatically as ROIs are changed.
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Bioimage Analysis / Icy / Extensions / ROI tagger
GNU General Public License v3.0 onlyCreate a list of tag and apply them to ROIs.
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Bioimage Analysis / Texture segmentation
GNU General Public License v3.0 onlyIt is a toy plugin to test semi-supervised texture segmentation using the new SLBPriu texture descriptor.
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Benjamin BARDIAUX / Blob Analysis Lab Ecole
MIT LicenseUpdated -
Metagenomics / FastGenes
MIT LicenseFrom experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM
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Supplementary material for the paper: "Leishmania genome dynamics during environmental adaptation reveals strain-specific differences in gene copy number variation, karyotype instability, and telomeric amplification"
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Statistical-Genetics / RAISS
MIT LicenseA python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium
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GIPhy / gbk2ENA
GNU Affero General Public License v3.0Converting Genbank files into EMBL-like files suitable for submission to ENA
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Konstantin PETROV / ipman
Creative Commons Attribution Non Commercial Share Alike 4.0 InternationalMaestro Cluster documentation
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Blaise LI / bam25prime
GNU General Public License v3.0 or laterUtilities to collapse reads in bam files to their 5' end
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Metagenomics / moonbase
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