fiji

Fiji plugin to register 3D movies and tracks of cells moving on fiber imaged in transmitted light.

Local z-projection via the determination of a plane of reference.

A Fiji tool to detect, track and analyze cell-to-cell contacts.

First reported in Samassa et al., 2020, "Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and TCR vesicular trafficking"