Explore projects
-
IAH public / TrackMate-ExTrack
GNU General Public License v3.0 onlyPerform ExTrack results in TrackMate.
Archived 0Updated -
Quang tru HUYNH / gP2S
Apache License 2.0Updated -
Bioimage Analysis / Draw 3D Sphere VTK
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Active Contour
GNU General Public License v3.0 onlyActive Contours plugin for Icy
Updated -
Bioimage Analysis / Ruler Helper
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / RandomGenerators
GNU General Public License v3.0 onlyThis project is dedicated to protocol blocks generating random objects:
doubles integers subimagesUpdated -
IAH public / CellContactAnalyzer
GNU General Public License v3.0 onlyA Fiji tool to detect, track and analyze cell-to-cell contacts.
First reported in Samassa et al., 2020, "Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and TCR vesicular trafficking"
Updated -
Bioimage Analysis / Intensity Profile
GNU General Public License v3.0 onlyA plugin allowing to create a graphic showing the intensity profile of 2D ROIs
Updated -
Bioimage Analysis / Connected Components
GNU General Public License v3.0 onlyThis plugin extracts groups of connected pixels in 2D and 3D based on their intensity and that of the background. Works on both binary and gray-scale data. Output can be pushed to the swimming pool for other plug-ins to further exploi
Updated -
Bioimage Analysis / Icy Random Crops
GNU General Public License v3.0 onlyAn Icy plugin made for random generation of crops on a given sequence
Updated -
-
-
Bioimage Analysis / 3D Rotation
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Angle Descriptor
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / BioFlow
GNU General Public License v3.0 onlyUpdated -
This Icy plugin allows to compute and display the histogram of a sequence, with a more accurate control on the histogram parameters. It also enables the computation of histograms on ROIs.
Updated -
Bioimage Analysis / Label Extractor
GNU General Public License v3.0 onlyExtracts labeled objects from a binary or labeled image into ROI using connected component analysis
Updated -
Bioimage Analysis / Texture segmentation
GNU General Public License v3.0 onlyIt is a toy plugin to test semi-supervised texture segmentation using the new SLBPriu texture descriptor.
Updated -
Bioimage Analysis / Particles
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / DeepLearning4J for Icy
GNU General Public License v3.0 onlyDeepLearning4J library for Icy. Website: https://deeplearning4j.konduit.ai/ Github: https://github.com/eclipse/deeplearning4j
Updated