Explore projects
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IAH public / TrackMate-ExTrack
GNU General Public License v3.0 onlyPerform ExTrack results in TrackMate.
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Quang tru HUYNH / gP2S
Apache License 2.0Updated -
Bioimage Analysis / RandomGenerators
GNU General Public License v3.0 onlyThis project is dedicated to protocol blocks generating random objects:
doubles integers subimagesUpdated -
IAH public / CellContactAnalyzer
GNU General Public License v3.0 onlyA Fiji tool to detect, track and analyze cell-to-cell contacts.
First reported in Samassa et al., 2020, "Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and TCR vesicular trafficking"
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Bioimage Analysis / Intensity Profile
GNU General Public License v3.0 onlyA plugin allowing to create a graphic showing the intensity profile of 2D ROIs
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Bioimage Analysis / Icy Random Crops
GNU General Public License v3.0 onlyAn Icy plugin made for random generation of crops on a given sequence
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Bioimage Analysis / BioFlow
GNU General Public License v3.0 onlyUpdated -
This Icy plugin allows to compute and display the histogram of a sequence, with a more accurate control on the histogram parameters. It also enables the computation of histograms on ROIs.
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Bioimage Analysis / DeepLearning4J for Icy
GNU General Public License v3.0 onlyDeepLearning4J library for Icy. Website: https://deeplearning4j.konduit.ai/ Github: https://github.com/eclipse/deeplearning4j
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Bioimage Analysis / Matlab Communicator
GNU General Public License v3.0 onlyLow-level functions for interactive communication between Icy and Matlab.
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Bioimage Analysis / Oshi Core JDK6 for Icy
GNU General Public License v3.0 onlyThe Oshi core library (JDK6) for Icy
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Bioimage Analysis / Xuggler Video Importer
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Matlab Importer
GNU General Public License v3.0 onlyImport Matlab *.mat files as sequences in Icy
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Bioimage Analysis / Matlab Exporter
GNU General Public License v3.0 onlyExport sequences from Icy to Matlab *.mat files
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Bioimage Analysis / Track Processor Time Clip
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Matlab IO
GNU General Public License v3.0 onlyLow-level library for reading and writing Matlab .mat files
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Bioimage Analysis / MsgPack Core
GNU General Public License v3.0 onlyMsgPack Core library for Icy.
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