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IdA Public / Zellige-core
BSD 2-Clause "Simplified" LicenseUpdated -
Bioimage Analysis / Icy / Extensions / Apache Commons IO
GNU General Public License v3.0 onlyUpdated -
Icy wrapper for the Apache Commons CSV library.
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Bioimage Analysis / Icy / Extensions / Flanagan
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Icy / Extensions / Connected Components
GNU General Public License v3.0 onlyThis plugin extracts groups of connected pixels in 2D and 3D based on their intensity and that of the background. Works on both binary and gray-scale data. Output can be pushed to the swimming pool for other plug-ins to further exploi
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Bioimage Analysis / Icy / Extensions / Quickhull
GNU General Public License v3.0 onlyQuickHull library for Icy. Computes convex envelopes of random point sets in 2D or 3D.
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Bioimage Analysis / Icy / Extensions / Track Motion Profiler
GNU General Public License v3.0 onlyTrack Motion Profiler plugin for Icy. This plugin adds Motion Profiler and Motion Filter processors to Track Manager.
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Bioimage Analysis / Icy / Extensions / Apache Commons Codec
GNU General Public License v3.0 onlyUpdated -
The Apache Commons Lang Library for Icy
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GIPhy / MSTclust
GNU Affero General Public License v3.0Minimum Spanning Tree-based clustering
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GIPhy / C2A.A2C
GNU Affero General Public License v3.0Translating and back-translating codon and amino-acid sequence files
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GIPhy / REQ
GNU Affero General Public License v3.0Estimating a confidence value at each branch of a phylogenetic tree from a matrix of pairwise evolutionary distances
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Bioimage Analysis / Icy / Extensions / Track Intensity Profile
GNU General Public License v3.0 onlyUpdated -
Bioimage Analysis / Icy / Extensions / Spot Tracking
GNU General Public License v3.0 onlySpot Tracking plugin for Icy
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Bioimage Analysis / Icy / Extensions / Spot Detector
GNU General Public License v3.0 onlySpot detector plugin for Icy
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Bioimage Analysis / Icy / Extensions / Vecmath
GNU General Public License v3.0 onlyProvides 3D vector mathematics classes.
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Bioimage Analysis / Icy / Extensions / ROI tagger
GNU General Public License v3.0 onlyCreate a list of tag and apply them to ROIs.
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Bioimage Analysis / Icy / Extensions / ROI Pool
GNU General Public License v3.0 onlyManage a list of ROIs that the user can store and pop back in one click.
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Bioimage Analysis / Icy / Extensions / Linear Programming
GNU General Public License v3.0 onlyA open-source utility library for linear programming in Java with the simplex algorithm.
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Bioimage Analysis / Icy / Extensions / Track Manager
GNU General Public License v3.0 onlyTrack Manager plugin for Icy
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