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MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.
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Rayan CHIKHI / ercunitigsprod
MIT LicenseUpdated 

HaissLab / Data Management / Pypelines
MIT LicenseUpdated 
HaissLab / Data Management / ONE
MIT LicenseOne is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).
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StatisticalGenetics / jass
MIT LicenseA web interface for the Joint Analysis of GWAS Summary Statistics.
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StatisticalGenetics / RAISS
MIT LicenseA python package to impute the SNP summary statistics from neighboring SNPs summary statistics by taking advantage of linkage desiquilibrium
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Blaise LI / bioinfo_utils
GNU General Public License v3.0 or laterUpdated 
This will contain the minimal necessary codes to reproduce the image analysis (BF and IF) from the preprint https://arxiv.org/abs/2303.17522
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