Explore projects

delineation cutoff estimates

Code and data for the article "Integrating information from historical data into mechanistic models for influenza forecasting" by Alessio Andronico, Juliette Paireau and Simon Cauchemez

Local z-projection via the determination of a plane of reference.

Repository for snakemake rules

Converting Genbank files into EMBL-like files suitable for submission to ENA

Rapid Peptides Generator (RPG) is a software dedicated to predict proteases-induced cleavage sites on amino acid sequences.

https://rapid-peptide-generator.readthedocs.io

Remote bio-image analysis course with python. Website: https://iah-public.pages.pasteur.fr/20241008_remote_python_bioimage_analysis_course_day2

Some helpers for my HTS snakemake workflows.