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Building a supermatrix of characters from a set of multiple sequence alignments

Estimating a confidence value at each branch of a phylogenetic tree from a matrix of pairwise evolutionary distances

Translating and back-translating codon and amino-acid sequence files

Extracting a nucleotide segment from a FASTA-formatted file

Creating an AGP file from a FASTA-formatted scaffold sequence file

description

Surf feature matching

SLIC: Simple Linear Iterative Clustering

An Icy plugin implementing this popular segmentation technique

Local z-projection via the determination of a plane of reference.

This project contains icy utilitary var classes to help protocol creation.

This project is dedicated to protocol blocks generating random objects:

doubles integers subimages

Icy is an open community platform for bioimage informatics

Spot detector plugin for Icy

Active Contours plugin for Icy

HK-Means plugin for Icy

EzPlug plugin for Icy

Blocks plugin for Icy. Also known as "Protocols SDK" This plugin provide interfaces to make plugin compatible with Protocols(Graphical Programming).