Building a supermatrix of characters from a set of multiple sequence alignments
Estimating a confidence value at each branch of a phylogenetic tree from a matrix of pairwise evolutionary distances
Translating and back-translating codon and amino-acid sequence files
Extracting a nucleotide segment from a FASTA-formatted file
Creating an AGP file from a FASTA-formatted scaffold sequence file
Surf feature matching
SLIC: Simple Linear Iterative Clustering
An Icy plugin implementing this popular segmentation technique
Local z-projection via the determination of a plane of reference.
This project contains icy utilitary var classes to help protocol creation.
This project is dedicated to protocol blocks generating random objects:
Icy is an open community platform for bioimage informatics
Spot detector plugin for Icy
Active Contours plugin for Icy
HK-Means plugin for Icy
EzPlug plugin for Icy
Blocks plugin for Icy. Also known as "Protocols SDK"
This plugin provide interfaces to make plugin compatible with Protocols(Graphical Programming).