From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM
version of gratin adapted for inference of fBM properties
Pytorch implementation of the Spline dist cell segmentation method
Automatic detection of epithelial cell events as cell extrusion
scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)
MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.
One is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).