Explore projects

From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM

version of gratin adapted for inference of fBM properties

Region segmentation

Pytorch implementation of the Spline dist cell segmentation method

Automatic detection of epithelial cell events as cell extrusion

scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)

https://github.com/dialvarezs/alphafold

MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.

One is the interaction layer between the Alyx database (metadatas) and your programmatic interface (python).