MANOCCA test is based on covariance. This project implements MANOCCA, MANOVA and provides an simulation environment and an explainer.
scripts to prepare gwas data for using PAINTOR (https://github.com/gkichaev/PAINTOR_V3.0)
Automatic detection of epithelial cell events as cell extrusion
Pytorch implementation of the Spline dist cell segmentation method
version of gratin adapted for inference of fBM properties
From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM
Open source code for AlphaFold.
Recent analyses on Stephanie's data
import from github
scientific python course given in 2021
The impact of genetic diversity on gene essentiality within the E. coli species