Use biomaj3 with PostgreSQL

Web interface for Biomaj management

library to visualize biological data: http://rplanel.pages.pasteur.fr/bioviz-js

library to visualize biological data: http://rplanel.pages.pasteur.fr/bioviz-js

Blast approach is aimed to annotate a metagenomic sequencing using an approach mostly based on blast.

BrainBox is a web application that let's you annotate and segment 3D brain imaging data in real time, collaboratively.

Translating and back-translating codon and amino-acid sequence files

A wrapper for the canu long read assembly tool

couchapp and input data parser to create capsuledb

A Fiji tool to detect, track and analyze cell-to-cell contacts.

First reported in Samassa et al., 2020, "Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and TCR vesicular trafficking"

TopSpin on CentOs-7

random files to ease the use of CentOS locally

Displaying Interactive 3D Model Views in Web Browsers using chimera (see: https://www.cgl.ucsf.edu/Outreach/technotes/globeview/)