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A web interface for the Joint Analysis of GWAS Summary Statistics.

Read Assignment, Mapping, and Phylogenetic Analysis in Real Time

A module handling basic fonctionnality needed in django project such as base.html using bootstrap, account settings, preferences management, ...

Cytoscape.js visualisation of PASTML trees

From experiences acquired developing https://gitlab.pasteur.fr/metagenomics/metagenedb, create a light version of it with FastAPI as a backend and SQLModel as ORM

library to visualize biological data: http://rplanel.pages.pasteur.fr/bioviz-js

Web interface for Biomaj management

You can find here the scripts corresponding to this paper: "A simple, reproducible and cost-effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach"

couchapp and input data parser to create capsuledb