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HUB transcriptomic snakemake pipeline

scientific python course given in 2021

Automatic detection of epithelial cell events as cell extrusion

Icy is an open community platform for bioimage informatics

Tools to design and analyse CRISPRi experiments

Compute RNA expression around a reference position

Some scripts to plot results from my HTS pipelines.

Evolutionary Contact wrapper for ARIA software

script that makes a visual representation of a spot containing ICE.

Napari plugin to ease manual correction of epithelial movie segmentation

Rapid Peptides Generator (RPG) is a software dedicated to predict proteases-induced cleavage sites on amino acid sequences.

https://rapid-peptide-generator.readthedocs.io